1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATGGAGAATCGCATGGAGGAGGTGTTGGTTGTATTATTGATGGATGTCCTCCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAGgtgcttgcctatgaaatcatctctttatcttcattgaactgcttgcattgtgggataaaaacacttgggaggttgaagagaaatactttataggatagtt...
species | Glycine max |
transcript | GLYMA10G35560.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAG GAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATGEST: gi|193387927|gb|FK355178.1|FK355178
genomic: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAGgtgcttgcct ... ttatgtatagGAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATG
EST: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAG GAGGCCAGGTCAGAGCCGAATTACAACTCCTAGEST: gi|193690154|gb|FK634535.1|FK634535
genomic: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAGgtgcttgcct ... ttatgtatagGAGGCCAGGTCAGAGCCGAATTACAACTCCTAG
EST: GAAGCTGATATGCAATTGGATCTTGACAGAAG GAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATGEST: gi|37996069|gb|CF807658.1|CF807658
genomic: GAAGCTGATATGCAATTGGATCTTGACAGAAGgtgcttgcct ... ttatgtatagGAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATG
EST: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAG GAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATGEST: gi|19453140|gb|BM954550.1|BM954550
genomic: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAGgtgcttgcct ... ttatgtatagGAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATG
EST: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAG GAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATGEST: gi|6666177|gb|AW277636.1|AW277636
genomic: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAGgtgcttgcct ... ttatgtatagGAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATG
EST: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAG GAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATG
genomic: CCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAGgtgcttgcct ... ttatgtatagGAGGCCAGGTCAGAGCCGAATTACAACTCCTAGAAAGGAGACTGATACATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGAGAATCGCATGGAGGAGGTGTTGGTTGTATTATTGATGGATGTCCTCCTCACCTTCCTCTCTCCGAAGCTGATATGCAATTGGATCTTGACAGAAGgtgcttgcctatgaaatcatctctttatcttcattgaactgcttgcattgtgggataaaaacacttgggaggttgaagagaaatactttataggatagtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgtggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgggagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagagaaa