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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCGAGGAAAGAAGTGTTTAGTCATTGATCCGAAGCTCGGAGACTCTCTCTCGCTTATCATACAGACATCCATTCTCAAGgcattttttttcttgcccttagttatttactgagtttatttattttacaatggaacatcaatttgttataattttatttttttcgaacattttaatacaa...

Basic information

species Glycine max
transcript GLYMA10G35210.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193510551|gb|FK468057.1|FK468057
EST:     CGAAGCTCGGAGACTCTCTCTCGCTTATCATACAGACATCCATTCTCAAG                         GAGCATGGAGTTGAATTGCGGCATCTTTCCGGGGACCCAATTCAAACTGAC
genomic: CGAAGCTCGGAGACTCTCTCTCGCTTATCATACAGACATCCATTCTCAAGgcattttttt ... ttacaaacagGAGCATGGAGTTGAATTGCGGCATCTTTCCGGGGACCCAATTCAAACTGAC
EST: gi|208118803|gb|GD918724.1|GD918724
EST:     CGAAGCTCGGAGACTCTCTCTCGCTTATCATACAGACATCCATTCTCAAG                         GAGCATGGAGTTGAATTGCGGCATCTTTCCGGGGACCCAATTCAAACTGAC
genomic: CGAAGCTCGGAGACTCTCTCTCGCTTATCATACAGACATCCATTCTCAAGgcattttttt ... ttacaaacagGAGCATGGAGTTGAATTGCGGCATCTTTCCGGGGACCCAATTCAAACTGAC
EST: gi|213591873|gb|DB973424.1|DB973424
EST:     CGAAGCTCGGAGACTCTCTCTCGCTTATCATACAGACATCCATTCTCAAG                         GAGCATGGAGTTGAATTGCGGCATCTTTCCGGGGACCCAATTCAAACTGAC
genomic: CGAAGCTCGGAGACTCTCTCTCGCTTATCATACAGACATCCATTCTCAAGgcattttttt ... ttacaaacagGAGCATGGAGTTGAATTGCGGCATCTTTCCGGGGACCCAATTCAAACTGAC