1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGTCATCTCTCTAATCAAGTATGCATTCAGTAATGGAATCACTTTCTTTGATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAGgtatgttatattatatatgatacacagaggaatgctaaggatgctttctttgatcataaagagtcttattatgacagtgtcagagagagaaagagaatat...
species | Glycine max |
transcript | GLYMA10G30360.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAG GCACAGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGGEST: gi|15664769|gb|BI702140.1|BI702140
genomic: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAGgtatgttata ... tgattctcagGCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGG
EST: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAG GCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGGEST: gi|151402721|gb|EV272534.1|EV272534
genomic: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAGgtatgttata ... tgattctcagGCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGG
EST: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAG GCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGGEST: gi|192300845|gb|FG991167.1|FG991167
genomic: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAGgtatgttata ... tgattctcagGCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGG
EST: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAG GCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGGEST: gi|42722877|gb|CK768776.1|CK768776
genomic: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAGgtatgttata ... tgattctcagGCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGG
EST: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAG GCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGGEST: gi|298174714|gb|HO014745.1|HO014745
genomic: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAGgtatgttata ... tgattctcagGCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGG
EST: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAG GCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGG
genomic: ATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAGgtatgttata ... tgattctcagGCACTGAAGGAGTTGCCACGAGATCAAATTCAGATTGCCTCAAAATTTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTCATCTCTCTAATCAAGTATGCATTCAGTAATGGAATCACTTTCTTTGATACTTCCGATTTTTACGGTCCCTACACTAATGAAGTTCTCGTAGGAAAGgtatgttatattatatatgatacacagaggaatgctaaggatgctttctttgatcataaagagtcttattatgacagtgtcagagagagaaagagaatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gagaaaga