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ACCTGAACATTATCGAGGACCAAAACTGAAAGTGGCAATTATTGGAGCTGGACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctccttctctctctgtttctcttaatataagccactgatattttaatattttgaaattggatgttatggtatagcatatagtaaagttgttttt...
species | Glycine max |
transcript | GLYMA10G30220.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAG GTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTTEST: gi|193532831|gb|FK492833.1|FK492833
genomic: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctcc ... tatcattcagGTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTT
EST: CAACTGCAGTGGAACTCTTGGATCAAGGCCATGAG GTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTTEST: gi|213589825|gb|DB969618.1|DB969618
genomic: CAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctcc ... tatcattcagGTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTT
EST: GACTTGCAGGTATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAG GTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTTEST: gi|151401347|gb|EV271161.1|EV271161
genomic: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctcc ... tatcattcagGTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTT
EST: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAG GTGGATATCTATGAGTCAAGACCTTTTATTGGAGGCAAAGTTGGCTCTTTTEST: gi|209717713|gb|BW671531.1|BW671531
genomic: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctcc ... tatcattcagGTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTT
EST: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAG GTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTTEST: gi|209702720|gb|BW652763.1|BW652763
genomic: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctcc ... tatcattcagGTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTT
EST: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAG GTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTTEST: gi|192300798|gb|FG989710.1|FG989710
genomic: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctcc ... tatcattcagGTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTT
EST: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAG GTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTT
genomic: GACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctcc ... tatcattcagGTGGATATCTATGAGTCAAGACCTTTTATTGGTGGCAAAGTTGGCTCTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTGAACATTATCGAGGACCAAAACTGAAAGTGGCAATTATTGGAGCTGGACTTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGCCATGAGgtttggctccttctctctctgtttctcttaatataagccactgatattttaatattttgaaattggatgttatggtatagcatatagtaaagttgttttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc