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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTCCCGTTGCTTCAGAAACTGTTTACTGCTAACTCTGATCGGAAGAAACTCGCGCCAAATGCTTTTGTTCTTGTTCCTACTCGCGAACTAAGTCAACAGgtgcatttacttgtttcaatttctattattatttttttaaaatttaatttggatagaaattgatttcgtgttatttcag

Basic information

species Glycine max
transcript GLYMA10G29360.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7588541|gb|AW704264.1|AW704264
EST:     TCGCGCCAAATGCTTTTGTTCTTGTTCCTACTCGCGAACTAAGTCAACAG                         GTATATGCGGAAGTGAAGTCTCTGGTTGAATTATGCAGAGTTCAGCTGAAA
genomic: TCGCGCCAAATGCTTTTGTTCTTGTTCCTACTCGCGAACTAAGTCAACAGgtgcatttac ... gttatttcagGTATATGCGGAAGTGAAGTCTCTGGTTGAATTATGCAGAGTTCAGCTGAAA
EST: gi|23726946|gb|BU761485.1|BU761485
EST:     TCGCGCCAAATGCTTTTGTTCTTGTTCCTACTCGCGAACTAAGTCAACAG                         GTATATGCGGAAGTGAAGTCTCTGGTTGAATTATGCAGAGTTCAGCTGAAA
genomic: TCGCGCCAAATGCTTTTGTTCTTGTTCCTACTCGCGAACTAAGTCAACAGgtgcatttac ... gttatttcagGTATATGCGGAAGTGAAGTCTCTGGTTGAATTATGCAGAGTTCAGCTGAAA
EST: gi|208185495|gb|GD982008.1|GD982008
EST:     GCGCCAAATGCTTTTTGTTTCTTGTTCCTACTCGCGAACTAAGTCAACAG                         GTATATGCGGAAGTGAAGTCTCTGGTTGAATTATGCAGAGTTCAGCTGAAA
genomic: GCGCCAAATGC-TTTTG-TTCTTGTTCCTACTCGCGAACTAAGTCAACAGgtgcatttac ... gttatttcagGTATATGCGGAAGTGAAGTCTCTGGTTGAATTATGCAGAGTTCAGCTGAAA