Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGTCTGTGGTGGAGACAGTTGTTTTCTAATAAACAATCACAACAAGTCAAGCCAGAATGAGCCTGAGATTATgtatgtcagaaatttatgctgaaaattatgattaatgctgtttattattccttctgagttccaacttttccttaaatttctgagatggttggatttcttt...

Basic information

species Glycine max
transcript GLYMA10G11720.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209718689|gb|BW674779.1|BW674779
EST:     TTTCTAATAAACAATCACAACAAGTCAAGCCAGAATGAGCCTGAGATTAT                         CATTAGAGGAACCACGGCTGTTGAGATTGCATCTGGCCTCCATTGGTATCT
genomic: TTTCTAATAAACAATCACAACAAGTCAAGCCAGAATGAGCCTGAGATTATgtatgtcaga ... tatttgtcagCATTAGAGGAACCACGGCTGTTGAGATTGCATCTGGCCTCCATTGGTATCT
EST: gi|209728536|gb|BW663536.1|BW663536
EST:     TTTCTAATAAACAATCACAACAAGTCAAGCCAGAATGAGCCTGAGATTAT                         CATTAGAGGAACCACGGCTGTTGAGATTGCATCTGGCCTCCATTGGTATCT
genomic: TTTCTAATAAACAATCACAACAAGTCAAGCCAGAATGAGCCTGAGATTATgtatgtcaga ... tatttgtcagCATTAGAGGAACCACGGCTGTTGAGATTGCATCTGGCCTCCATTGGTATCT