1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TCATGAAGAAAGCGCTTCCTCCCAACGGGAAAATCGCCAAGGACGCCAAGGAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGAgtacacttctttgtttctcatgcgcgctttcattttttgtttgttattcgcgttaattgaatgaataaattgcgttgttgtttaacag
species | Glycine max |
transcript | GLYMA10G05610.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGA AGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGAEST: gi|298187763|gb|HO031720.1|HO031720
genomic: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGAgtacacttct ... tgtttaacagAGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGA
EST: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGA AGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGAEST: gi|298196414|gb|HO041157.1|HO041157
genomic: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGAgtacacttct ... tgtttaacagAGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGA
EST: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGA AGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGAEST: gi|16341802|gb|BI967397.1|BI967397
genomic: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGAgtacacttct ... tgtttaacagAGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGA
EST: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGA AGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGAEST: gi|298197939|gb|HO039478.1|HO039478
genomic: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGAgtacacttct ... tgtttaacagAGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGA
EST: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGA AGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGA
genomic: GAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGAgtacacttct ... tgtttaacagAGCGAGCGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGCGACGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCATGAAGAAAGCGCTTCCTCCCAACGGGAAAATCGCCAAGGACGCCAAGGAAACCGTGCAGGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCAGCGAgtacacttctttgtttctcatgcgcgctttcattttttgtttgttattcgcgttaattgaatgaataaattgcgttgttgtttaacag
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