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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAACGCGATTGAGAATTTGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAGgttagtgtggatggaactcgtgttttctctcgttaatatgtgttctttcgagttctgaaaaattgtgtcgttcgttactcgatttggttacgttgggaaa...

Basic information

species Glycine max
transcript GLYMA10G04020.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193723155|gb|FK658319.1|FK658319
EST:     TGCGAAACGGTGTTGAAATTTGTGATCTGGTGAGCCATGAATGCTAGAAG                         AGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
genomic: TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAGgttagtgtgg ... tctgtttcagAGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
EST: gi|192323181|gb|FK018952.1|FK018952
EST:     TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAG                         AGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
genomic: TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAGgttagtgtgg ... tctgtttcagAGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
EST: gi|193701629|gb|FK639523.1|FK639523
EST:     TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAG                         AGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
genomic: TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAGgttagtgtgg ... tctgtttcagAGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
EST: gi|193640670|gb|FK588533.1|FK588533
EST:     TGCGAAACGGTGTTGAAATTTGTGATCTGGTGAGCCATGAATGCTAGAAG                         AGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
genomic: TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAGgttagtgtgg ... tctgtttcagAGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
EST: gi|192298747|gb|FG988613.1|FG988613
EST:     TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAG                         AGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
genomic: TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAGgttagtgtgg ... tctgtttcagAGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
EST: gi|31306277|gb|CD391480.1|CD391480
EST:     TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAG                         AGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG
genomic: TGCGAAACGGTGTTGGAATTTGTGATCTGGTGAGCCATGAATGCTAGAAGgttagtgtgg ... tctgtttcagAGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGG