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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGGATGGTTTCATTATCAGGAAGCCAACTAAGATTCATTCCCGTTCCCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaactttttctaacattaagtgtgtttttgctaattgcaaatgaacctgtggtcatcaaacatttaaaaccttgtaggattaaactgagttgcat...

Basic information

species Glycine max
transcript GLYMA10G02050.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G02050.1 (Glycine max), 5'ss of exon 2
lower sequence: Vv05s0077g01840.t01 (Vitis vinifera), 5'ss of exon 2
AAGGATGGTTTCATTATCAGGAAGCCAACTAAGATTCATTCCCGTTCCCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaactttttctaacattaagtgtgtt--tttgctaattgcaaatgaacctgtggtcatcaaacatttaaaaccttgtaggattaaactgagttgcat
|| |||||||| || |||||||||||||||||||| || || || || || || || |||||||||||||||||||| ||||||||||||||||| |||||||||     || |  ||  |  || ||  |  ||   |   |||| ||     |     ||    ||| | |  |    || |   || | | |  |  | 
AAAGATGGTTTTATCATCAGGAAGCCAACTAAGATCCACTCTCGATCTCGGGCACGGAGAATGAAGGAGGCCAAGAGAAAGGGACGTCACTCTGGATATGgtatggttaattgttaaatgtatagggtcatggttaaatggctgcatatctttatagatgcaatgtacagtaatgaatcagttgatgtaca-taaccttta-

upper sequence: GLYMA10G02050.1 (Glycine max), 5'ss of exon 2
lower sequence: Vv07s0005g00840.t01 (Vitis vinifera), 5'ss of exon 2
AAGGATGGTTTCATTATCAGGAAGCCAACTAAGATTCATTCCCGTTCCCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaactttttctaacattaagtgtgtttt-tgctaattgcaaatgaacctgtggtcatcaaacatttaaaaccttgtaggattaaactgagttgcat------
|||||||||||  | ||||||||||||||||| |||||||| || || ||||| ||  ||||||||||||||||| | ||||| ||||||||||| |||||||| |   || || | |  ||   ||  ||   |   || |    || |   | |  |     |||||||      | |  | || | | |   ||  ||      
AAGGATGGTTTTGTCATCAGGAAGCCAACTAAAATTCATTCACGATCTCGTGCACGTCGAATGAAGGAGGCCAAGCGAAAGGGGCGTCACTCTGGATATGgtattt---ttattttgagtttgcatgcattaggtttcaagtaaggattatattttattttgagaacattt----tttgggggaataatatttgtttttatgtatgt

upper sequence: GLYMA10G02050.1 (Glycine max), 5'ss of exon 2
lower sequence: PP1S83_173V6.1 (Physcomitrella patens), 5'ss of exon 1
-AAGGATGGTTTCATTATCAGGAAGCCAACTAAGATTCATTCCCGTTCCCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaactttttctaacattaagtgtgtttttgctaattgcaaatgaacctgtggtcatcaaacatttaaaaccttgtaggattaaactgagttgcat----
   || | |      |  |     |    | ||||   |    ||   |  || |  | ||| |      |  |   |  |||  || |   ||    | | |  |     ||   |     | ||| | |||| | |  | |    ||    |||| | |  |  | |||  |   || ||   ||  | | | |         
GCGGGCTCGCGCTCGTCGCGCTTTGGAGGCCAAGAGGAAGGGACGGCACTCTGGTTACGGAAAGCGTCGTGGTACCCGCGAGGCTCGGCTTCCTACCAAGgtttagcttgcttgcttgctcgttagtct-ttttggtttttcgtttctg----tgtgatgaatactcgtttttagttttttatttttttattcactctttcttct

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7590791|gb|AW706462.1|AW706462
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|192324403|gb|FK015754.1|FK015754
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|58019153|gb|CX705895.1|CX705895
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|298187521|gb|HO034670.1|HO034670
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGATACAAGAGAGGCTATGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|151396898|gb|EV266771.1|EV266771
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|298199593|gb|HO043470.1|HO043470
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|193711160|gb|FK644357.1|FK644357
EST:     CTCGCAGTAATTGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: CTCGCAG-AA-TGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|298164121|gb|HO013766.1|HO013766
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGAACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|208290600|gb|GE082776.1|GE082776
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCA
EST: gi|192298598|gb|FG988539.1|FG988539
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|193410717|gb|FK378888.1|FK378888
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|24136245|gb|BU926755.1|BU926755
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|192325408|gb|FK017179.1|FK017179
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|193386286|gb|FK350346.1|FK350346
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|193646698|gb|FK591337.1|FK591337
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|298164063|gb|HO013708.1|HO013708
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|193696762|gb|FK637960.1|FK637960
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|17024021|gb|BM095055.1|BM095055
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|298182050|gb|HO026225.1|HO026225
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|298170827|gb|HO015803.1|HO015803
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|208174538|gb|GD971299.1|GD971299
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|192307683|gb|FK001627.1|FK001627
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|192331151|gb|FK020932.1|FK020932
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTATGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|192330272|gb|FK019852.1|FK019852
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|208144392|gb|GD942143.1|GD942143
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTTTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|213606812|gb|DB961023.1|DB961023
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|298197703|gb|HO045182.1|HO045182
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAAGCTCCTCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|192331152|gb|FK020933.1|FK020933
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTATGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|298190467|gb|HO032588.1|HO032588
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|58018867|gb|CX705609.1|CX705609
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|58018147|gb|CX704889.1|CX704889
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|207701508|gb|GD684055.1|GD684055
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGA
EST: gi|151402155|gb|EV271968.1|EV271968
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
EST: gi|207772151|gb|GD744872.1|GD744872
EST:     TGCTCGCAGAATGAAGGAGGCCGAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAA
EST: gi|192319924|gb|FK012972.1|FK012972
EST:     TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATG                         GTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA
genomic: TGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaact ... aaattaatagGTAAGCGTAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AAGGATGGTTTCATTATCAGGAAGCCAACTAAGATTCATTCCCGTTCCCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGTTATGgtatgtaactttttctaacattaagtgtgtttttgctaattgcaaatgaacctgtggtcatcaaacatttaaaaccttgtaggattaaactgagttgcat

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGGA