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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTCAGCACCACTGAGCGGTTAATAGCTTTTGCTCTGCTAGTTGAGGCTTATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaagcacttattattgttgttgtacttgttgaaacttttttgcatgtctaattcttttctttgaagttagaaccggtttttgaatgctagagaaggatg...

Basic information

species Glycine max
transcript GLYMA10G00610.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14125750|gb|BG790188.1|BG790188
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaagcactt ... ttggctacagGCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|7925896|gb|AW831922.1|AW831922
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaagcactt ... ttggctacagGCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|213594465|gb|DB970031.1|DB970031
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaagcactt ... ttggctacagGCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|9987546|gb|BE661654.1|BE661654
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaagcactt ... ttggctacagGCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|11274935|gb|BF325260.1|BF325260
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaagcactt ... ttggctacagGCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|192294686|gb|FG986535.1|FG986535
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaagcactt ... ttggctacagGCTTCCTGTAATGAAGGGTCCGAAAAAGTTGAGAGGGCATTTATTCTACAG