1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATGCATTTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATTgtaagtggacttctgcattttgaaatttttagtttgcaattgcaaggactcacattgtttcgtgttaaaataattgtttcaaatttttgttaattctata...
species | Glycine max |
transcript | GLYMA09G38550.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATT GTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCAEST: gi|26268343|gb|CA819406.1|CA819406
genomic: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATTgtaagtggac ... attttattagGTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCA
EST: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATT GTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCAEST: gi|24206105|gb|BU965358.1|BU965358
genomic: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATTgtaagtggac ... attttattagGTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCA
EST: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATT GTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCAEST: gi|8283037|gb|BE020598.1|BE020598
genomic: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATTgtaagtggac ... attttattagGTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCA
EST: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATT GTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCAEST: gi|208234389|gb|GE033292.1|GE033292
genomic: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATTgtaagtggac ... attttattagGTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCA
EST: CATGATTACAAAATAACAATT GTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCEST: gi|15813110|gb|BI785385.1|BI785385
genomic: CATGATT-CAAAAT-ACAATTgtaagtggac ... attttattagGTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTC
EST: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATT GTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCA
genomic: TTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATTgtaagtggac ... attttattagGTCACTTGATGGAAAAGATTGAAGCTGAGAATTTGCTGCATAGAGCTTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCATTTTGGTGGATGAGAATGACCGTGTGGTTGGTCATGATTCAAAATACAATTgtaagtggacttctgcattttgaaatttttagtttgcaattgcaaggactcacattgtttcgtgttaaaataattgtttcaaatttttgttaattctata
- - - - TGGTGG
- - - - GGTGGA