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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACAGTTCTTGATTACTAGAAATGgtatgattgagatctgagtatgcctttacatcatgcgtgtttttttcttcttctcctaaaagcaagcagtaatatctgagaatttcctgttctgtttcatggtcatgctgatttttggagtacttaacag

Basic information

species Glycine max
transcript GLYMA09G36540.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA09G36540.1 (Glycine max), 5'ss of exon 2
lower sequence: AT5G61500.1 (Arabidopsis thaliana), 5'ss of exon 2
GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACAGTTCTTGATTACTAGAAATGgtatgattgagatctgagtatgcctttacatcatgcgtgtttttttcttcttctcctaaaagcaagcagtaatatctgagaatttcctgttctgtttcatggtcatgctgatttttggagtacttaacag
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GGAATCTGGTGACGCAAGCAAAAGGAAGCCATACTTGCCCTCGGACAAACAGTTTTTGATTACTAGAAATGgtaaatttgaaatct----------ttaaagcttatttctgttggctttgtagttctgattgcacattatgttgt----ggacttttta--cgggttgacag----------------------------