1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTGCTGCTGAAACGTAATCGATCTTATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatagcattagcaagcatatgaaatgccatttttgtttttatcttcatatttattttgtcaatgatgatgcatgtgattggataccatgcgtgtatatag
species | Glycine max |
transcript | GLYMA09G36160.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGGTCTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|151400158|gb|EV269972.1|EV269972
genomic: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|48574977|gb|CO036172.1|CO036172
genomic: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|213620256|gb|DB961401.1|DB961401
genomic: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|298174703|gb|HO014734.1|HO014734
genomic: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|298191681|gb|HO035763.1|HO035763
genomic: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|298171261|gb|HO016293.1|HO016293
genomic: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|254323598|gb|GR840239.1|GR840239
genomic: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
genomic: TATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCTGCTGAAACGTAATCGATCTTATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGgtaaacatagcattagcaagcatatgaaatgccatttttgtttttatcttcatatttattttgtcaatgatgatgcatgtgattggataccatgcgtgtatatag
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