1 5' 3' | 2 5' 3' | 3 5' 3' |
ATTTTTGCTGCTGGTGCTTTGTTGAGTACCCTATCCATTCGCCTCGGTTACAAGTTAAAGCAGGCAGTCGACTCCAAGCCGAAGCAAAATGCAACTACTGgtcagaaaggtccttatgtactgtttgggggacaccattctcccccttctgcgtttaatttttttatcctaagtgggaaaataaactcaacttaatagtcaaaatggtttagtgcctttgtctattgtggattcttacttcatattatttgttactacag
species | Glycine max |
transcript | GLYMA09G35690.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAAGTTAAAGCAGGCAGTCGACTCCAAGCCGAAGCAAAATGCAACTACTG GAAATGGAAAATCCACCCACACAAAAAACTCCACAGATTGCTTTATGCAGTEST: gi|192324614|gb|FK016475.1|FK016475
genomic: CAAGTTAAAGCAGGCAGTCGACTCCAAGCCGAAGCAAAATGCAACTACTGgtcagaaagg ... gttactacagGAAATGGAAAATCCACCCACACAAAAAACTCCACAGATTGCTTTATGCAGT
EST: CAAGTTAAAGCAGGCAGTCGACTCCAAGCCGAAGCAAAATGCAACTACTGGTCAGAAAG
genomic: CAAGTTAAAGCAGGCAGTCGACTCCAAGCCGAAGCAAAATGCAACTAC---T------Ggtcagaaagg ... gt
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTTTGCTGCTGGTGCTTTGTTGAGTACCCTATCCATTCGCCTCGGTTACAAGTTAAAGCAGGCAGTCGACTCCAAGCCGAAGCAAAATGCAACTACTGgtcagaaaggtccttatgtactgtttgggggacaccattctcccccttctgcgtttaatttttttatcctaagtgggaaaataaactcaacttaatagtcaaaatggtttagtgcctttgtctattgtggattcttacttcatattatttgttactacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA