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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCCATCAAAAACATCGTACCGGACATTGAATCCATTGCCCAAGATTGCTTAAAGTCTTGGGAAGGCCGTTTGATCACCACTTTCCTTGAAATGAAAACGgtgagtgagccctccaaaacagacacagcacaaaacagagctaaacagagctcctctgctttccttctctgctcatttttccttcgaaaacaaaaataat...

Basic information

species Glycine max
transcript GLYMA09G35250.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|17402191|gb|BM178973.1|BM178973
EST:     TAAAGTCTTGGGAAGGCCGTTTGATCACCACTTTCCTTGAAATGAAAACG                         TTCACCTTCAACGTTGCTCTGCTTTCAATTTTCGGAAAAGAAGAGATTCTG
genomic: TAAAGTCTTGGGAAGGCCGTTTGATCACCACTTTCCTTGAAATGAAAACGgtgagtgagc ... tgtcctgcagTTCACCTTCAACGTTGCTCTGCTTTCAATTTTCGGAAAAGAAGAGATTCTG
EST: gi|17518601|gb|BM187643.1|BM187643
EST:     TAAAGTCTTGGGAAGGCCGTTTGATCACCACTTTCCTTGAAATGAAAACG                         TTCACCTTCAACGTTGCTCTGCTTTCAATTTTCGGAAAAGAAGAGATTCTG
genomic: TAAAGTCTTGGGAAGGCCGTTTGATCACCACTTTCCTTGAAATGAAAACGgtgagtgagc ... tgtcctgcagTTCACCTTCAACGTTGCTCTGCTTTCAATTTTCGGAAAAGAAGAGATTCTG