1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CAGTGGTTGATCCTTCTGGTGTGTGCGCTGCTGTTGCTGATATCAGAAGCTTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGgtaaggaatttttgctgtgtcttttcatatatttaatcatgttcttaatctaatgcttattattttcaatgatatttgggatattgaaattcaacatattatgcag
species | Glycine max |
transcript | GLYMA09G35050.4 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTG TTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGATEST: gi|18733683|gb|BM527753.1|BM527753
genomic: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGgtaaggaatt ... tattatgcagTTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGAT
EST: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTG TTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGATEST: gi|21888360|gb|BQ741573.1|BQ741573
genomic: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGgtaaggaatt ... tattatgcagTTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGAT
EST: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTG TTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGATEST: gi|9986444|gb|BE660552.1|BE660552
genomic: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGgtaaggaatt ... tattatgcagTTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGAT
EST: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTG TTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGATEST: gi|213614158|gb|DB964902.1|DB964902
genomic: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGgtaaggaatt ... tattatgcagTTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGAT
EST: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTG TTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGATEST: gi|15664114|gb|BI701485.1|BI701485
genomic: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGgtaaggaatt ... tattatgcagTTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGAT
EST: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTG TTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGAT
genomic: TTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGgtaaggaatt ... tattatgcagTTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGTGGTTGATCCTTCTGGTGTGTGCGCTGCTGTTGCTGATATCAGAAGCTTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGgtaaggaatttttgctgtgtcttttcatatatttaatcatgttcttaatctaatgcttattattttcaatgatatttgggatattgaaattcaacatattatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT