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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAACTGAATCCTATAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACTgtaagaattaattgagcagtgaatgcatttcaattttcaagtgacttttacgggcttgtggatgttgattttgtattttattattttctcctcgtttag

Basic information

species Glycine max
transcript GLYMA09G33160.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9899441|gb|BE608409.1|BE608409
EST:     TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACT                         CCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACTgtaagaatta ... cctcgtttagCCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
EST: gi|18734891|gb|BM528445.1|BM528445
EST:     TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACT                         CCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACTgtaagaatta ... cctcgtttagCCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
EST: gi|19053956|gb|BM732623.1|BM732623
EST:     TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACT                         CCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACTgtaagaatta ... cctcgtttagCCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
EST: gi|15288236|gb|BI472127.1|BI472127
EST:     TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACT                         CCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACTgtaagaatta ... cctcgtttagCCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
EST: gi|308098228|gb|HO759969.1|HO759969
EST:     TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACT                         CCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACTgtaagaatta ... cctcgtttagCCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
EST: gi|120534087|gb|EH262220.1|EH262220
EST:     TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACT                         CCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACATGAAACTgtaagaatta ... cctcgtttagCCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGG