1 5' 3' | 2 5' 3' | 3 5' 3' |
GGAAATGCATACCTATTACGAGAGGTGGTGGAATTTATCAAGAGCACATGAATGAAGCTCTTGAGCGCTTAAATGATGGAGAATGGgtatctctatgtaacgtttaatactttttcccctcatacaagcttaactcttttatgatgatattttgaaagtactgattgttattaccttctacttcta...
species | Glycine max |
transcript | GLYMA09G32750.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATCAAGAGCACATGAATGAAGCTCTTGAGCGCTTAAATGATGGAGAATGG CTGCATACTTTTCCAGAAGGAAAAGTGTATCAAGAAGATGCACCTATAAGGEST: gi|58023687|gb|CX710428.1|CX710428
genomic: ATCAAGAGCACATGAATGAAGCTCTTGAGCGCTTAAATGATGGAGAATGGgtatctctat ... gttatggcagCTGCATACTTTTCCAGAAGGAAAAGTGTATCAAGAAGATGCACCTATAAGG
EST: ATCAAGAGCACATGAATGAAGCTCTTGAGCGCTTAAATGATGGAGAATGG CTGCATACTTTTCCAGAAGGAAAAGTGTATCAAGAAGATGCACCTATAAGGEST: gi|12688315|gb|BG154651.1|BG154651
genomic: ATCAAGAGCACATGAATGAAGCTCTTGAGCGCTTAAATGATGGAGAATGGgtatctctat ... gttatggcagCTGCATACTTTTCCAGAAGGAAAAGTGTATCAAGAAGATGCACCTATAAGG
EST: ATCAAGAGCACATGAATGAAGCTCTTGAGCGCTTAAATGATGGAGAATGG CTGCATACCTTTCCAGAAGGAAAAGTGTATCAAGAAGATGCACCTATAAGG
genomic: ATCAAGAGCACATGAATGAAGCTCTTGAGCGCTTAAATGATGGAGAATGGgtatctctat ... gttatggcagCTGCATACTTTTCCAGAAGGAAAAGTGTATCAAGAAGATGCACCTATAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAATGCATACCTATTACGAGAGGTGGTGGAATTTATCAAGAGCACATGAATGAAGCTCTTGAGCGCTTAAATGATGGAGAATGGgtatctctatgtaacgtttaatactttttcccctcatacaagcttaactcttttatgatgatattttgaaagtactgattgttattaccttctacttcta
- - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tttcccc