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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAATTTAGCTCTTGCGTGCGAAAATTCTCGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCAgtaagttctttctcttctcttatgcttcgagtttctctttatcttcttcatttttgaataattttttttttttgctttttattgattttaaatggtttgtgtttgttcgatttgattttgtag

Basic information

species Glycine max
transcript GLYMA09G28650.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207680009|gb|GD663189.1|GD663189
EST:     CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCA                         AGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATT
genomic: CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCAgtaagttctt ... gattttgtagAGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATT
EST: gi|209722479|gb|BW682829.1|BW682829
EST:     CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCA                         AGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
genomic: CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCAgtaagttctt ... gattttgtagAGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
EST: gi|208065074|gb|GD867120.1|GD867120
EST:     CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCA                         AGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTA
genomic: CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCAgtaagttctt ... gattttgtagAGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTA
EST: gi|209725416|gb|BW658278.1|BW658278
EST:     CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCA                         AGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
genomic: CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCAgtaagttctt ... gattttgtagAGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
EST: gi|209711120|gb|BW676339.1|BW676339
EST:     CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCA                         AGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
genomic: CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCAgtaagttctt ... gattttgtagAGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
EST: gi|209700495|gb|BW660895.1|BW660895
EST:     CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCA                         AGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
genomic: CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCAgtaagttctt ... gattttgtagAGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
EST: gi|213618229|gb|DB972999.1|DB972999
EST:     CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCA                         AGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC
genomic: CGGAATATTTTGAATCCAGGAAATCATGCACGCTCCAGTTCTAGTTCTCAgtaagttctt ... gattttgtagAGGACTCTTTGAAACGAGAGTCTGGATCTAAGGTCCGCTATGCTATTATTC