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CAAGAAAATACGCACTAGCCACAAGgttagttagtgaatctcaaattcctaatctctataatgcttgcgagttttgtttagatttgaattagtagtactcttgttgccgttggatttttctccta...
species | Glycine max |
transcript | GLYMA09G04910.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAAGAAAATACGCACTAGCCACAAG GTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCTEST: gi|192331343|gb|FK019632.1|FK019632
genomic: CAAGAAAATACGCACTAGCCACAAGgttagttagt ... tggaaattagGTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCT
EST: CAAGAAAATACGCACTAGCCACAAG GTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCTEST: gi|19934922|gb|BQ079952.1|BQ079952
genomic: CAAGAAAATACGCACTAGCCACAAGgttagttagt ... tggaaattagGTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCT
EST: CAAGAAAATACGCACTAGCCACAAG GTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCTEST: gi|12496378|gb|BG047034.1|BG047034
genomic: CAAGAAAATACGCACTAGCCACAAGgttagttagt ... tggaaattagGTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCT
EST: CAAGAAAATACGCACTAGCCACAAG GGTGAGCCGTGGAGTATTGGTGGAATCAAAAGCACTGCCAATCATCCTCCTEST: gi|8827691|gb|BE211421.1|BE211421
genomic: CAAGAAAATACGCACTAGCCACAAGgttagttagt ... tggaaattagG-TGAGC-GTGGAGTAT-GGTGGAATCAAAAGCACTGCCAATCAACCTCCT
EST: CAAGAAAATACGCACTAGCCACAAG GTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCTEST: gi|213603558|gb|DB962704.1|DB962704
genomic: CAAGAAAATACGCACTAGCCACAAGgttagttagt ... tggaaattagGTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCT
EST: CAAGAAAATACGCACTAGCCACAAG GTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCTEST: gi|209725601|gb|BW657981.1|BW657981
genomic: CAAGAAAATACGCACTAGCCACAAGgttagttagt ... tggaaattagGTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCT
EST: CAAGAAAATACGCACTAGCCACAAG GTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCT
genomic: CAAGAAAATACGCACTAGCCACAAGgttagttagt ... tggaaattagGTGAGCGTGGAGTATGGTGGAATCAAAAGCACTGCCAATCAACCTCCTCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGAAAATACGCACTAGCCACAAGgttagttagtgaatctcaaattcctaatctctataatgcttgcgagttttgtttagatttgaattagtagtactcttgttgccgttggatttttctccta
AAGAAA