Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|193712465|gb|FK649628.1|FK649628EST: TGTCGTAGAACGATTGAGCTTACTCAAGGCTGCTACCACATGACATGCTG GTGTGGACATGAGTTTTGCTATTCATGTGGTGGGGAGTACCGAGAAGGGCA
genomic: TGTCGTAGAACGATTGAGCTTACTCAAGGCTGCTACCACATGACATGCTGgtaagatatc ... ttcatttcagGTGTGGACATGAGTTTTGCTATTCATGTGGTGGGGAGTACCGAGAAGGGCA
EST:
gi|13788000|gb|BG650592.1|BG650592EST: TGTCGTAGAACGATTGAGCTTACTCAAGGCTGCTACCACATGACATGCTG GTGTGGACATGAGTTTTGCTATTCATGTGGTGGGGAGTACCGAGAAGGGCA
genomic: TGTCGTAGAACGATTGAGCTTACTCAAGGCTGCTACCACATGACATGCTGgtaagatatc ... ttcatttcagGTGTGGACATGAGTTTTGCTATTCATGTGGTGGGGAGTACCGAGAAGGGCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTACCTTTCACCGTCTTGCTCAGAATAAAAGGTGGAAGCGTTGTCAGCAGTGTCGTAGAACGATTGAGCTTACTCAAGGCTGCTACCACATGACATGCTGgtaagatatcaaaaagtgttgactatttttctatttattttattacatggtctactatgaattttattatgcagccaaactattatatagaaagtggaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG