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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCTTGTATACTTGGATCATGCTGGGGCAACTCTATACTCTGACCTGCAAATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTCgtatcctacctaatcttatacgattgtttcacatcacacttcaatattcttattactgactttattaactgaaattccttaatttcgatactag

Basic information

species Glycine max
transcript GLYMA09G00460.2
intron # 2
splice site 5'
intron type U12 (go to U12 genes for details)

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213608696|gb|DB968983.1|DB968983
EST:     AATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTC                         ACAGCCAAAGTGACTCCAGTTCTGCAACTCTTGACATTGTCAAGAACGCCC
genomic: AATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTCgtatcctacc ... tcgatactagACAGCCAAAGTGACTCCAGTTCTGCAACTCTTGACATTGTCAAGAACGCCC
EST: gi|213617030|gb|DB961510.1|DB961510
EST:     AATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTC                         ACAGCCAAAGTGACTCCAGTTCTGCAACTCTTGACATTGTCAAGAACGCCC
genomic: AATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTCgtatcctacc ... tcgatactagACAGCCAAAGTGACTCCAGTTCTGCAACTCTTGACATTGTCAAGAACGCCC
EST: gi|213607757|gb|DB959096.1|DB959096
EST:     AATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTC                         ACAGCCAAAGTGACTCCAGTTCTGCAACTCTTGACATTGTCAAGAACGCCC
genomic: AATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTCgtatcctacc ... tcgatactagACAGCCAAAGTGACTCCAGTTCTGCAACTCTTGACATTGTCAAGAACGCCC
EST: gi|209697830|gb|BW670086.1|BW670086
EST:     AATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTC                         ACAGCCAAAGTGACTCCAGTTCTGCAACTCTTGACATTGTCAAGAACGCCC
genomic: AATGGAATCTGTTTTCAATGATCTCACTACTAACCTATACGCAAATCCTCgtatcctacc ... tcgatactagACAGCCAAAGTGACTCCAGTTCTGCAACTCTTGACATTGTCAAGAACGCCC