1 5' 3' | 2 5' 3' | 3 5' 3' |
ATGGAGGAAGAGGCGAAGAGGATGGCAAGGGTTTCAGAGAGGAGCTTGCGACTTTGGCGAAGGAAGTGGCTAGGTTGGAGACGGTTCGTGTTTATGCAGgttggttgttttttcaatttttttatttatttttgaattgtgcaaaagggtgaacattgtgggaagaattttgatttgacggttctgtgttgaagtgttt...
species | Glycine max |
transcript | GLYMA08G47180.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GACTTTGGCGAAGGAAGTGGCTAGGTTGGAGACGGTTCGTGTTTATGCAG AGACAGCACTGAAACTTGATACTTTGGTTGGTGATATTGAGGATGCTGTATEST: gi|6070458|gb|AW099845.1|AW099845
genomic: GACTTTGGCGAAGGAAGTGGCTAGGTTGGAGACGGTTCGTGTTTATGCAGgttggttgtt ... tgtctttcagAGACAGCACTGAAACTTGATACTTTGGTTGGTGATATTGAGGATGCTGTAT
EST: GACTTTGGCGAAGGAAGTGGCTAGGTTGGAGACGGTTCGTGTTTATGCAG AGACAGCACTGAAACTTGATACTTTGGTTGGTGATATTGAGGATGCTGTAT
genomic: GACTTTGGCGAAGGAAGTGGCTAGGTTGGAGACGGTTCGTGTTTATGCAGgttggttgtt ... tgtctttcagAGACAGCACTGAAACTTGATACTTTGGTTGGTGATATTGAGGATGCTGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGAGGAAGAGGCGAAGAGGATGGCAAGGGTTTCAGAGAGGAGCTTGCGACTTTGGCGAAGGAAGTGGCTAGGTTGGAGACGGTTCGTGTTTATGCAGgttggttgttttttcaatttttttatttatttttgaattgtgcaaaagggtgaacattgtgggaagaattttgatttgacggttctgtgttgaagtgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttgtggg