1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGTTCTGGACAATGTCTCGTGTTTATGTTGGGAATTTAGACCCTCGAGTCAGTGAGAGGGACCTCGAAGATGAATTTCGTATATATGGTGTTCTTAGGAGgtaatttcttcatcattctctctctcccaaaggaaaataactgttaaaatattggctagtgagttgcaagttgttgattttaattatgtgattagttgtt...
species | Glycine max |
transcript | GLYMA08G39830.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGTGAGAGGGACCTCGAAGATGAATTTCGTATATATGGTGTTCTTAGGAG TGTCTGGGTTGCTCGAAGACCACCGGGATATGCATTTATTGAGTTTGATGAEST: gi|192301057|gb|FG990127.1|FG990127
genomic: AGTGAGAGGGACCTCGAAGATGAATTTCGTATATATGGTGTTCTTAGGAGgtaatttctt ... ataaatatagTGTCTGGGTTGCTCGAAGACCACCGGGATATGCATTTATTGAGTTTGATGA
EST: AGTGAGAGGGACCTCGAAGATGAATTTCGTATATATGGTGTTCTTAGGAG TGTCTGGGTTGCTCGAAGACCACCGGGATATGCATTTATTGAGTTTGATGA
genomic: AGTGAGAGGGACCTCGAAGATGAATTTCGTATATATGGTGTTCTTAGGAGgtaatttctt ... ataaatatagTGTCTGGGTTGCTCGAAGACCACCGGGATATGCATTTATTGAGTTTGATGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTCTGGACAATGTCTCGTGTTTATGTTGGGAATTTAGACCCTCGAGTCAGTGAGAGGGACCTCGAAGATGAATTTCGTATATATGGTGTTCTTAGGAGgtaatttcttcatcattctctctctcccaaaggaaaataactgttaaaatattggctagtgagttgcaagttgttgattttaattatgtgattagttgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG