1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GCAAATGCTTATTCATCAAGGAAAAGTTCTAAAAGATGGTACTACTTTGGAGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAGgtgaaaatttcttttatttacttattttttttttcctattttgaaaaggaaactgcattgatctctgtactaccaaaatgtattcaattatttggctgtg...
species | Glycine max |
transcript | GLYMA08G32090.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAG ACTAAGAGTTCATCTGGTGAAGGATCTACTACTTCAACTGCACCTTCAGCTEST: gi|193463621|gb|FK426929.1|FK426929
genomic: AGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAGgtgaaaattt ... aatatggcagACTAAGAGTTCATCTGGTGAAGGATCTACTACTTCAACTGCACCTTCAGCT
EST: AGGAAAATAAAGTAGCTGAAAATAGTTTTATTGTAATTATGTTATCAAAG ACTAAGAGTTCATEST: gi|151408744|gb|EV278552.1|EV278552
genomic: AGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAGgtgaaaattt ... aatatggcagACTAAGAGTTCAT
EST: AGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAG ACTAAGAGTTCATCTGGTGAAGGATCTACTACTTCAACTGCACCTTCAGCTEST: gi|208103169|gb|GD901047.1|GD901047
genomic: AGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAGgtgaaaattt ... aatatggcagACTAAGAGTTCATCTGGTGAAGGATCTACTACTTCAACTGCACCTTCAGCT
EST: AGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAG ACTAAGAGTTCATCTGGTGAAGGATCTACTACTTCAACTGCACCTTCAGCTEST: gi|207766428|gb|GD736516.1|GD736516
genomic: AGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAGgtgaaaattt ... aatatggcagACTAAGAGTTCATCTGGTGAAGGATCTACTACTTCAACTGCACCTTCAGCT
EST: AGGAAAATAAAGTAGCTGAAAATAGTTTTATTGTAATTATGTTATCAAAG ACTAAGAGTTCATCTGGTGAAGGATCTACTACTTCAACTGC
genomic: AGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAGgtgaaaattt ... aatatggcagACTAAGAGTTCATCTGGTGAAGGATCTACTACTTCAACTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAAATGCTTATTCATCAAGGAAAAGTTCTAAAAGATGGTACTACTTTGGAGGAAAATAAAGTAGCTGAAAGTAGTTTTATTGTAATTATGCTATCAAAGgtgaaaatttcttttatttacttattttttttttcctattttgaaaaggaaactgcattgatctctgtactaccaaaatgtattcaattatttggctgtg
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