1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGGATGCTACTGCCATCAAAAAGAAGGTTGAGGATGTAATGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctctctttctcgattcaatcaaatgaatagtgtgtctccttactcttttctgtgtcctatttttagagtaaaaactggcggttttgttaataat...
species | Glycine max |
transcript | GLYMA08G22410.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAAACCATCCCGAAGGTCCATTCGGCACGAAGEST: gi|7924358|gb|AW830384.1|AW830384
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAG
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAGEST: gi|23729970|gb|BU763091.1|BU763091
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAG
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAGEST: gi|22540930|gb|BU090773.1|BU090773
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAG
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAACTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAGEST: gi|16346699|gb|BI972294.1|BI972294
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAG
EST: TGCCAATCGCTACTGGTCACGAGCGCTAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATATACCATCCCGAAGGTCCATTCGGCACGAAGEST: gi|4396994|gb|AI495991.1|AI495991
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAG
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGEST: gi|15338027|gb|BI498683.1|BI498683
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGG
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAGEST: gi|4290153|gb|AI438028.1|AI438028
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAG
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAGEST: gi|26058026|gb|CA800940.1|CA800940
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAG
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAGEST: gi|4313609|gb|AI460728.1|AI460728
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACGAAG
EST: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATTCCC-AAGGTCCATTCGGCACGAA
genomic: TGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctct ... ttttggttagGGAAGGAATATTCTTGAAATAGACCAT-CCCGAAGGTCCATTCGGCACGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGATGCTACTGCCATCAAAAAGAAGGTTGAGGATGTAATGCCAATCGCTACTGGTCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctctctttctcgattcaatcaaatgaatagtgtgtctccttactcttttctgtgtcctatttttagagtaaaaactggcggttttgttaataat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT