1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TATAATTTCTGCTATTGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGATgtaattctgattttttcttcagcaatttcttttataactaaaattactaaacttaaggtttgaaagattccattttacacccttaatttctctaatatctatgtatactgtaacttgcag
species | Glycine max |
transcript | GLYMA08G20830.4 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATACAAAAGAT CATCACGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGAEST: gi|193304649|gb|FK272694.1|FK272694
genomic: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGATgtaattctga ... taacttgcagCATTGCGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGA
EST: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATACAAAAGAT CATCACGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGAEST: gi|7690859|gb|AW758996.1|AW758996
genomic: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGATgtaattctga ... taacttgcagCATTGCGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGA
EST: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGAT CATTGCGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGAEST: gi|193647235|gb|FK588402.1|FK588402
genomic: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGATgtaattctga ... taacttgcagCATTGCGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGA
EST: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATACAAAAGAT CATCACGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGAEST: gi|208151571|gb|GD950412.1|GD950412
genomic: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGATgtaattctga ... taacttgcagCATTGCGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGA
EST: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATACAAAAGAT CATCACGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGAEST: gi|308099093|gb|HO760934.1|HO760934
genomic: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGATgtaattctga ... taacttgcagCATTGCGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAGA
EST: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGAT CATTGCGGATCCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAG
genomic: GTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGATgtaattctga ... taacttgcagCATTGCGGAT-CAAGAAGGGACTTGGAGAGGATGGACTATTCTATTAGTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATAATTTCTGCTATTGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTAGTTCTCTTTGAACGGACAGATACAAAAGATgtaattctgattttttcttcagcaatttcttttataactaaaattactaaacttaaggtttgaaagattccattttacacccttaatttctctaatatctatgtatactgtaacttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG