1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GATGCTGAAGTTAATGAGTATCGGCAGCAGAGGGAAATAACTGTTGAAGGGCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgttcattttttttcctatttcgtcagtttttctttgcaccttcttcagcttaaagtacatgactcttctctttattactttgttttgcacaa...
species | Glycine max |
transcript | GLYMA08G20670.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAG AATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCAEST: gi|4288854|gb|AI441392.1|AI441392
genomic: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgt ... tttaatccagAATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
EST: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTG-TTTTCCAG AAT-TGTACTGCAAGAAAT-ACAAAAGCTGGCTT-ACTGAACCTACACCCAEST: gi|7925520|gb|AW831546.1|AW831546
genomic: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgt ... tttaatccagAATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
EST: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAG AATACGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCAEST: gi|209700616|gb|BW670334.1|BW670334
genomic: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgt ... tttaatccagAATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
EST: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAG AATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCAEST: gi|213595546|gb|DB968510.1|DB968510
genomic: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgt ... tttaatccagAATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
EST: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAG AATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCAEST: gi|151397571|gb|EV267444.1|EV267444
genomic: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgt ... tttaatccagAATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
EST: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAG AATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCAEST: gi|9986238|gb|BE660346.1|BE660346
genomic: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgt ... tttaatccagAATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
EST: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAG AATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCAEST: gi|298192717|gb|HO033151.1|HO033151
genomic: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgt ... tttaatccagAATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
EST: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAG AATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
genomic: GCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgt ... tttaatccagAATATGTACTGCAAGAAATTACAAAAGCTGGCTTTACTGAACCTACACCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGCTGAAGTTAATGAGTATCGGCAGCAGAGGGAAATAACTGTTGAAGGGCGAGATATCCCGAAACCTGTCAAGACCTTTCACGATGCTGGTTTTCCAGgtatttctgttcattttttttcctatttcgtcagtttttctttgcaccttcttcagcttaaagtacatgactcttctctttattactttgttttgcacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttcttc