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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAACAGCAGCAGCAGCAGCGTCTTCTACAGCAACAGCAACAACAACAACAGCCGCAGAACCTTCACCAGTCACTGGCCTCTCACTACCATCTCTTACACgtaatgtaacccttttcaatactttagtcccatctacttattcttttatttttcttttcaataaaggaattgcttgttatgggcacag

Basic information

species Glycine max
transcript GLYMA08G20540.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193617411|gb|FK566593.1|FK566593
EST:     CACTGGCCTCTCACTACCATCTCTTACAC                         TTGGTGGAGAATTTGGCTGAGGTTATCGAACATGGAACCCCGGATCAGCCG
genomic: CACTGGCCTCTCACTACCATCTCTTACACgtaatgtaac ... atgggcacagTTGGTGGAGAATTTGGCTGAGGTTATCGAACATGGAACCCCGGATCAGCCG
EST: gi|14991092|gb|BI316765.1|BI316765
EST:     TTCACCAGTCACTGGCCTCTCACTACCATCTCTTACAC                         TTGGTGGAGAATTTGGCTGAGGTTATCGAACATGGAACCCCGGATCAGCCG
genomic: TTCACCAGTCACTGGCCTCTCACTACCATCTCTTACACgtaatgtaac ... atgggcacagTTGGTGGAGAATTTGGCTGAGGTTATCGAACATGGAACCCCGGATCAGCCG