1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTCAAGTATTACTCAGATGACTGGCCAACAAACAATGCAAAGTTAGCTTTTGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAGgtaagcagtagagtttgactactattcatctatgaagtcacttcattttctattaggtgctaggggtggctatttcaatctaaccatgattcttggtgta...
species | Glycine max |
transcript | GLYMA08G20370.3 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAG CTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAGEST: gi|21256834|gb|BQ453722.1|BQ453722
genomic: TGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAGgtaagcagta ... ttatctgcagCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAG
EST: TGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAG CTGAGGTAACACTACTTGAGAACAATATCATTATTTATAAATTTGTACAAGEST: gi|7285995|gb|AW598482.1|AW598482
genomic: TGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAGgtaagcagta ... ttatctgcagCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAG
EST: TGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAG CTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAGEST: gi|193376778|gb|FK340973.1|FK340973
genomic: TGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAGgtaagcagta ... ttatctgcagCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAG
EST: GTTAAGACAAATGCTCGTACGGAAG CTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAGEST: gi|151410805|gb|EV280620.1|EV280620
genomic: GTTAAGACAAATGCTCGTACGGAAGgtaagcagta ... ttatctgcagCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAG
EST: TGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAG CTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAG
genomic: TGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAGgtaagcagta ... ttatctgcagCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCAAGTATTACTCAGATGACTGGCCAACAAACAATGCAAAGTTAGCTTTTGAGAAGTTTGTATTTACTAAGACTGTTAAGACAAATGCTCGTACGGAAGgtaagcagtagagtttgactactattcatctatgaagtcacttcattttctattaggtgctaggggtggctatttcaatctaaccatgattcttggtgta
- - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggggtgg