1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GAACTAATATTCAGACTAATGAAGAGGTTGCGGTTAAGCTTgtgagttttcggacctacgacataccctaatttgaaaaaaaaaagttttttttttatgtttgctaatttcaaatattctgtttggttgctgagaaaattt...
species | Glycine max |
transcript | GLYMA08G20320.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAACTAATATTCAGACTAATGAAGAGGTTGCGGTTAAGCTT GAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCCAAGCTGTATEST: gi|193578363|gb|FK537583.1|FK537583
genomic: GAACTAATATTCAGACTAATGAAGAGGTTGCGGTTAAGCTTgtgagttttc ... tttgattcagGAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCCAAGCTGTAT
EST: CGGTTAAGCTT GAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCCAAGCTGTATEST: gi|4287491|gb|AI441197.1|AI441197
genomic: CGGTTAAGCTTgtgagttttc ... tttgattcagGAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCCAAGCTGTAT
EST: GAACTAATATTCAGACTAATGAAGAGGTTGCGGTTAAGCTT GAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCCCAGCTGTAT
genomic: GAACTAATATTCAGACTAATGAAGAGGTTGCGGTTAAGCTTgtgagttttc ... tttgattcagGAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCCAAGCTGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACTAATATTCAGACTAATGAAGAGGTTGCGGTTAAGCTTgtgagttttcggacctacgacataccctaatttgaaaaaaaaaagttttttttttatgtttgctaatttcaaatattctgtttggttgctgagaaaattt
- - - - - - - - - TGAAGA
- - - - - - - - - - AAGAGG