1 5' 3' | 2 5' 3' | 3 5' 3' |
ATGCTGATTAGCTTGAAATTGTTGATCATTCAGCGTGCAAAAATGATGGGTTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTGgtatgatgtatgcctttttttcctaacttaaatgcatgtcttttcgaaatgtagtatgcatattgttcctagattatgaatgcaaaagaaaaagtaataa...
species | Glycine max |
transcript | GLYMA08G18780.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTG CACTTGTTTTGATGGAACATCTCAAGGCTGAGATAAAAGGTTCATCACTTAEST: gi|20498114|gb|BQ273044.1|BQ273044
genomic: TTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTGgtatgatgta ... ctctgtgcagCACTTGTTTTGATGGAACATCTCAAGGCTGAGATAAAAGGTTCATCACTTA
EST: TTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTG CACTTGTTTTGATGGAACATCTCAAGGCTGAGATAAAAGGTTCATCACTTAEST: gi|31310639|gb|CD395842.1|CD395842
genomic: TTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTGgtatgatgta ... ctctgtgcagCACTTGTTTTGATGGAACATCTCAAGGCTGAGATAAAAGGTTCATCACTTA
EST: TTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTG CACTTGTTTTGATGGAACATCTCAAGGCTGAGATAAAAGGTTCATCACTTAEST: gi|31561699|gb|CD487537.1|CD487537
genomic: TTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTGgtatgatgta ... ctctgtgcagCACTTGTTTTGATGGAACATCTCAAGGCTGAGATAAAAGGTTCATCACTTA
EST: TTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTG CACTTGTTTTGATGGAACATCTCAAGGCTGAGATAAAAGGTTCATCACTTA
genomic: TTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTGgtatgatgta ... ctctgtgcagCACTTGTTTTGATGGAACATCTCAAGGCTGAGATAAAAGGTTCATCACTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCTGATTAGCTTGAAATTGTTGATCATTCAGCGTGCAAAAATGATGGGTTGTAAAGAGCTGGCTAGTAAATTCAACCTTAAAATGATTCGAGCCATTGgtatgatgtatgcctttttttcctaacttaaatgcatgtcttttcgaaatgtagtatgcatattgttcctagattatgaatgcaaaagaaaaagtaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT