1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTGCAAGGATAAGTGTGTTATCTATCTAAAAACACAAGATGTCAGCTGGGCCTGGACTTGAATCTCTAGTAGATCgtaagacacctttatatatttatgttttgctttgatgtttggaattgtatgcattgccatattattttttgcgcttattaagtattaaaaacaactattt...
species | Glycine max |
transcript | GLYMA08G18410.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTAAAAACACAAGATGTCAGCTGGGCCTGGACTTGAATCTCTAGTAGATCAGACAATTTCEST: gi|151406500|gb|EV276315.1|EV276315
genomic: CTAAAAACACAAGATGTCAGCTGGGCCTGGACTTGAATCTC---TAG-T-AG---A--TCgtaagacacc ... a
EST: CTAAAAACACAAGATGTCAGCTGGGCCTGGACTTGAATCTCTAGTAGATCAGACAATTTCEST: gi|151406500|gb|EV276315.1|EV276315
genomic: CTAAAAACACAAGATGTCAGCTGGGCCTGGACTTGAATCTC---TAG-T-AG---A--TCgtaagacacc ... a
EST: CTAAAAACACAAGATGTCAGCTGGGCCTGGACTTGAATCTCTAGTAGATCAGACAATTTC
genomic: CTAAAAACACAAGATGTCAGCTGGGCCTGGACTTGAATCTC---TAG-T-AG---A--TCgtaagacacc ... a
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGCAAGGATAAGTGTGTTATCTATCTAAAAACACAAGATGTCAGCTGGGCCTGGACTTGAATCTCTAGTAGATCgtaagacacctttatatatttatgttttgctttgatgtttggaattgtatgcattgccatattattttttgcgcttattaagtattaaaaacaactattt
- - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - CAGCTG