1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CCTTCTGGGCACATGGAGAGGCCAAGGAGAAGGAGGCTTCCCCACTATCAATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAGgtttacctctctctttctgcataaacactatctgggtctctcaaagttctctcttttattactgggttttgttttgtttagagttttcttttttctagac...
species | Glycine max |
transcript | GLYMA08G17020.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAG CCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCTEST: gi|192296498|gb|FG989114.1|FG989114
genomic: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAGgtttacctct ... atgggtgtagCCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCT
EST: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAG CCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCTEST: gi|151409541|gb|EV279349.1|EV279349
genomic: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAGgtttacctct ... atgggtgtagCCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCT
EST: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAG CCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCTEST: gi|213589307|gb|DB961640.1|DB961640
genomic: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAGgtttacctct ... atgggtgtagCCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCT
EST: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAG CCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCTEST: gi|298190669|gb|HO032790.1|HO032790
genomic: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAGgtttacctct ... atgggtgtagCCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCT
EST: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAG CCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCTEST: gi|209706462|gb|BW680749.1|BW680749
genomic: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAGgtttacctct ... atgggtgtagCCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCT
EST: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAG CCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCT
genomic: ATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAGgtttacctct ... atgggtgtagCCCGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTTCTGGGCACATGGAGAGGCCAAGGAGAAGGAGGCTTCCCCACTATCAATTCCTTCTCCTATGGCGAAGAGCTTCACTTCTCACATTCCCCCAACAAGgtttacctctctctttctgcataaacactatctgggtctctcaaagttctctcttttattactgggttttgttttgtttagagttttcttttttctagac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc