Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|10237664|gb|BE806552.1|BE806552EST: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAG CTATTACCGGTGCACACAAGATAATTGTCGTGTAAAGAAAACGCG-GGAAC
genomic: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGgtatatctga ... catgtagaagCTATTACCGTTGCACACAAGATAATTGTCGTGTAAAGAAA-CGCGTGGAAC
EST:
gi|192300380|gb|FG991452.1|FG991452EST: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAG A
genomic: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGgtatatctga ... catgtagaag-
EST:
gi|192300380|gb|FG991452.1|FG991452EST: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAG A
genomic: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGgtatatctga ... catgtagaag-
EST:
gi|192300380|gb|FG991452.1|FG991452EST: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAG A
genomic: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGgtatatctga ... catgtagaag-
EST:
gi|192300380|gb|FG991452.1|FG991452EST: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAG A
genomic: AAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGgtatatctga ... catgtagaag-
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGTTTTGCTTCAAGACCATGAGCGATGTGGATGTATTGGACGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGgtatatctgatctttaatttaaagcttctctctttttgtttttgctttaatttagaaattgattaaagaatattaaattgatcaaacctttgatgatgat
- - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC