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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaaaatactactaatagtaataaagcaaaatattatttgttgacttacttctttgcacttttgaacaatcgttttttgataaaagaattaca...

Basic information

species Glycine max
transcript GLYMA08G15050.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: LOC_Os05g09020.2 (Oryza sativa), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaa--aatactactaatagta-ataaagcaaaatattatttgttgacttacttct-ttgcacttttgaacaatcgttttttgataaaagaattaca
|||||| ||| || || |  || ||| | |||||  | |||||||| | ||||||||||||||||||||||||  | || |||| ||| || |||| |||||| |  || |   |    |||   | ||     |      ||| | |  || | | | |  |    ||  ||| | || | | ||  | |     |   |   
GGATCGGGTTCAGGACGAGGTCGGAGGTGGAGATTCTTGATGATGGCTTCAAGTGGAGGAAGTACGGCAAGAAAGCTGTCAAGAACAGCCCAAATCCAAGgtacacgaatattgacgtcactgccactatgcccatttggctatcaatc-ttaattaattagtaccacaagtttaatcactagcttaattactggcgttct---

upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: LOC_Os05g46020.1 (Oryza sativa), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaaaatacta--ctaatagtaataaagcaaaatattatttgttgacttacttctttgcacttttgaacaatcgttttttgataaaagaattaca
||||||||||  | || || |||||| | |||||  | || || || ||||||||| | |||||||||||||||||||| |||| ||| ||||| | ||||||  ||  ||   ||||  | || |  |      |   | |  |||    ||    | | |   ||   |  | ||  |  |  | |           |  
GGATCGCGTTCCGGACGAAGTCAGAGATCGAGATTCTTGACGACGGCTACAAGTGGCGCAAGTACGGCAAGAAGTCCGTCAAGAACAGCCCCAACCCAAGgtactaactaaccaactaaaccaaaatcatatccccttcacaaaattcaa-gatgatcatatcatcatcataaatcatcccgtcgtcgtcgtcgtcgccat-

upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM5G863420_T01 (Zea mays), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaa-------------aatactactaat--agtaataa--agcaa--aatattatttgttgacttacttct-----ttgcacttttgaacaatcgttttttgataaaagaattaca------------------------------
||||||||||  | || |  || ||| | |||||| |||| || || |||||||||||||||||||||||||||||||| |||| ||| ||||| | |||||||  |  ||             |  || | || |  |||| ||   ||| |  | ||  | | || | |  | |||      |||||      | | ||| | | |  || | ||  | |||                              
GGATCGCGTTCCGGACGAGGTCGGAGATCGAGATCCTGGACGACGGCTACAAGTGGAGGAAGTACGGCAAGAAGTCCGTCAAGAACAGCCCCAACCCAAGgtaactagtaatctgtagtacatgatcacaattactccagtactagctagctaggagtagcactagtaggcgcatttcgcgatattgcagcagctagccatc-tctctcaatcacagtgtcacacatgacatgcgtggtggtgcgcgcccgcag

upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM2G137802_T01 (Zea mays), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaaaatac-tactaatagtaataaagcaaaatattatttgttgacttacttctttgcacttttgaacaatcgttttttgataaaagaattaca
||||||||||  | || |  || ||| | ||| || |||| || || |||||||||||||||||||||||||||||||| |||| ||| ||||| | ||||||   ||     | | | | |||     || | ||  | |  | | |    ||  |    |  |||||    ||||  ||| | | |             
GGATCGCGTTCCGGACGAGGTCGGAGGTCGAGGTCCTGGACGACGGCTACAAGTGGAGGAAGTACGGCAAGAAGTCCGTCAAGAACAGCCCCAACCCAAGgtagctaactgtgtgcgtcccaatt----tacaacaccacacgactggactgctagcgcact--cacttcacgacaactgttctgtcag------------

upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM2G163054_T02 (Zea mays), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaaaatactact--aatagtaataaagcaaaatattatttgttga------cttacttctttgcacttttgaacaa-tcgttttttgataaaagaattaca----------------------------------------------------
|||||| ||| ||||| | ||||||| | |||||| |||| ||||||| ||| ||||||||||| ||||||||| | || ||||| || || |||| |||||| |   | |  | |  ||  ||||    ||||  ||| |   |     |||      |   |      |||     ||| || | |       ||  ||   ||||                                                     
GGATCGGGTTCAGAACGAGATCAGAGGTGGAGATCTTGGACGATGGATTCAAATGGAGGAAGTATGGCAAGAAGGCTGTCAAGAGTAGCCCAAATCCAAGgtacacccatatgttcacctggaatatagttaaaataaattcccagaacatgaaagcaacaagcagaaaagcaacgaagaagaaatagaaacgaaatggaatgtttactggatcgatgctgatggatatataattgtgcatgcacacgtacgtacgtgcag

upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM2G057116_T01 (Zea mays), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaaa-atactactaatagtaataaagcaaaatattatttgttgacttacttc--tttgcacttttgaacaatcgttttttgataaaagaattaca--------------------------------------------------------------------------
|||||| ||| ||||| |  |||||| | |||||| |||| || |||| |||||||||||||||||| |||||| |||| |||| ||| || |||| ||||||  |  | |  | || | ||    |   ||   | |       | | | | || |  |    || |       ||||  |      ||| ||  |||                                                                              
GGATCGGGTTCAGAACGAGGTCAGAGGTGGAGATCTTGGACGACGGATTCAAGTGGAGGAAGTACGGGAAGAAGGCCGTCAAGAACAGCCCAAATCCAAGgtactactatactacacaaatacacatgcaaattaatagagcagctagctaaattcccccaacatgaaagccaagacaagagcaaagagatgaattaatcctcgcaaaacgaaacaaaaataaaaaaagaaatgtttacttcgtcgatgctgatggcttgtgcacatgcccatgtag

upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM2G101405_T01 (Zea mays), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGA---GCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaa-----aaaaaaaatac--tactaatagta-ataaagcaaaatattatttgtt-----------gacttacttctttgcacttttgaacaatcgttttttgataaaagaa-ttaca---------------------
   | |||||  ||   |  || ||   |   ||| |  | || || || ||||| |||||||||||||| ||||||||||| |||| ||| || ||||  |||| ||     |||  || |||    || |||||  |    |||||  |||| || |            || | |  |   ||      |  | |  |||  |    | ||  |  || ||                     
---TTGCGTTCCGAGTGAGGTCGGACGAGGACGAGGTACTCGACGACGGCTACAAATGGAGGAAGTACGGAAAGAAGTCCGTCAAGAACAGCCCTAATCCGAGgtgaatttataaagtaattacgcagctgatagtttaatttgcaaaccattaattatatcaaaagccaagagtgagctagatgtgtacatatatatgcgtgctggactgaagaaccttgcaaacgaacgaattggattccag

upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: Vv07s0031g01710.t01 (Vitis vinifera), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaaaatactactaatagtaataaagcaaaatattatttgttgacttacttctttgcacttttgaacaatcgttttttgataaaa--gaattaca---
|| | || || |  || ||||| ||  | ||||||||||||||||| |  |||||||||||||| || ||||| || ||||||| ||| ||||||| |||||||||  |  |  | |||  ||  || |||  ||   | || |   ||   | |  |  || |  |||  | | |   |   || || |||  | || |     
GGGTTGCCTTCAAGACGAAATCGGATTTGGAGATCATGGATGATGGGTTTAAGTGGAGGAAGTATGGGAAGAAATCAGTGAAGAACAGCCCCAATCCAAGgtaaaatgatcatca-tacatatcatattaagtcat--ttttttccatt--ttaaaattattaccgtttaaacccacgatggattaattaaattggatcatgagt

upper sequence: GLYMA08G15050.1 (Glycine max), 5'ss of exon 2
lower sequence: PP1S235_126V6.1 (Physcomitrella patens), 5'ss of exon 2
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaaaatactactaatagtaataaa---gcaaaatattatttgttgact-tacttctttgcacttttgaacaatcgttttttgataaaagaattaca-
|   |||| ||| |||||   | ||   |||  | ||||||||||| ||||||||||||||||| ||  ||||| | || || |  || ||  | |  |||||   ||     |      |||   |  |||   |  |  | ||  |||| |    |   || |||| ||     ||||  |  |   |  |||  |   ||  
GCTACGCGATTAAAACCAGGACTGATACTGATGTAATGGATGATGGTTACAAGTGGAGGAAGTATGGACAGAAGGCTGTCAAAAAAAGCCCTCACCCCAGgtactgaactttttcaagaaaatctcaggaaacgtggtaggtttttcttgtcgttagtgtctccttgcgct-----acaactgcctgcagtcaaatcaggaactc

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151401642|gb|EV271455.1|EV271455
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|213617389|gb|DB972943.1|DB972943
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAANAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|254329257|gb|GR833629.1|GR833629
EST:     AGTGGAGGAAGTACGGCCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AGTGGAGGAAGTACGG-CAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|254318272|gb|GR832440.1|GR832440
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|192301340|gb|FG994048.1|FG994048
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|254315885|gb|GR825694.1|GR825694
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|254318273|gb|GR832441.1|GR832441
EST:     AGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGT-CCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|16104910|gb|BI892650.1|BI892650
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|151406420|gb|EV276235.1|EV276235
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|213592560|gb|DB961820.1|DB961820
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|23060992|gb|BU578439.1|BU578439
EST:     AAGTGGAGGAAGTACGGCAAGAAATCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|120531921|gb|EH260054.1|EH260054
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|17519034|gb|BM188076.1|BM188076
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|21285762|gb|BQ473633.1|BQ473633
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|58018255|gb|CX704997.1|CX704997
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|15203563|gb|BI426331.1|BI426331
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|254329256|gb|GR833628.1|GR833628
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|15000925|gb|BI321739.1|BI321739
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|254321544|gb|GR824861.1|GR824861
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
EST: gi|254321543|gb|GR824860.1|GR824860
EST:     AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAG                         GAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA
genomic: AAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaa ... atgatgacagGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGgtaaaaaaaaaaatactactaatagtaataaagcaaaatattatttgttgacttacttctttgcacttttgaacaatcgttttttgataaaagaattaca

- - - - - - - - - - - - - - - - - - - - - - - - -  AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaagaat