1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CATCAGCGACCACGCCACCGCTCTCTTCCAAGCCGGCGTTCCCGTCATTCGCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGgttttctttctgcattccccttttcattcataactacgtgttctttctttaatactgtaattgcag
species | Glycine max |
transcript | GLYMA08G14720.3 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAG GCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCEST: gi|9564087|gb|BE473596.1|BE473596
genomic: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGgttttctttc ... gtaattgcagGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCC
EST: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAG GCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCEST: gi|193346295|gb|FK309787.1|FK309787
genomic: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGgttttctttc ... gtaattgcagGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCC
EST: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAG GCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCEST: gi|209706886|gb|BW661496.1|BW661496
genomic: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGgttttctttc ... gtaattgcagGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCC
EST: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAG GCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCEST: gi|33390301|gb|CA853508.1|CA853508
genomic: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGgttttctttc ... gtaattgcagGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCC
EST: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAG GCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCC
genomic: GCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGgttttctttc ... gtaattgcagGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATCAGCGACCACGCCACCGCTCTCTTCCAAGCCGGCGTTCCCGTCATTCGCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGgttttctttctgcattccccttttcattcataactacgtgttctttctttaatactgtaattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA