1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTCCAAAGGCGAAGGGAGGGTTGGCCAAACAACAAACGTAATTATTGGAAGCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttcattgttttcataaggctttctttgttttcgtttagtagctactacttgtgaatattggattaattgtttgtgctgcacag
species | Glycine max |
transcript | GLYMA08G10990.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAG GAGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGTEST: gi|5605980|gb|AI900078.1|AI900078
genomic: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttc ... tgctgcacagGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
EST: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAG GTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGTEST: gi|7796482|gb|AW781879.1|AW781879
genomic: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttc ... tgctgcacagGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
EST: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAG GTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGTEST: gi|20811540|gb|BQ296018.1|BQ296018
genomic: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttc ... tgctgcacagGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
EST: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAG GTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGTEST: gi|298197438|gb|HO044917.1|HO044917
genomic: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttc ... tgctgcacagGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
EST: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAG GTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGTEST: gi|22541149|gb|BU090992.1|BU090992
genomic: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttc ... tgctgcacagGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
EST: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAG GTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGTEST: gi|21888824|gb|BQ742037.1|BQ742037
genomic: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttc ... tgctgcacagGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
EST: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAG GTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGTEST: gi|6481967|gb|AW201238.1|AW201238
genomic: GCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttc ... tgctgcacagGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
EST: CCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAG GTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
genomic: C-ACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttc ... tgctgcacagGTGAACTCGTACCCAACCGATCGAGGATTTACCGCCATTGGAACTGGAGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCCAAAGGCGAAGGGAGGGTTGGCCAAACAACAAACGTAATTATTGGAAGCACTGCTGCCGATGATTCTAACAATGAATGGTTGGCTTTGGACCAGAAGgttttgtttcattgttttcataaggctttctttgttttcgtttagtagctactacttgtgaatattggattaattgtttgtgctgcacag
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