1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTACCCAACGCAAAACCTGGCAGAGAGAGTACGGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAGgtaatcttgtcttatatcttctgtcttgatcattaaatgtttttgctaaaaggatgctttgatcagtttgctgtataatcacaccagatatgtatggtga...
species | Glycine max |
transcript | GLYMA08G05390.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AATGCAAGGGATTCCGCCAGATATCTTGGCTGCTCATTACGGTGAAGAAG AGGATGATGTTCCGTCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGCEST: gi|16996888|gb|BM086260.1|BM086260
genomic: AATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAGgtaatcttgt ... tttaatccagAGGATGATGTTCCGTCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGC
EST: AATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAG AGGATGATGTTCCGTCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGCEST: gi|193476843|gb|FK439046.1|FK439046
genomic: AATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAGgtaatcttgt ... tttaatccagAGGATGATGTTCCGTCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGC
EST: AATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAG AGGATGATGTTCCGTCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGCEST: gi|254345519|gb|GR851681.1|GR851681
genomic: AATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAGgtaatcttgt ... tttaatccagAGGATGATGTTCCGTCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGC
EST: AATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAG AGGATGATGTTCCGTCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGC
genomic: AATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAGgtaatcttgt ... tttaatccagAGGATGATGTTCCGTCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACCCAACGCAAAACCTGGCAGAGAGAGTACGGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTACGGTGAAGAAGgtaatcttgtcttatatcttctgtcttgatcattaaatgtttttgctaaaaggatgctttgatcagtttgctgtataatcacaccagatatgtatggtga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG