1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
ATTAAAAGGCCGTCTTTCCTCATTTCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAGgtatttcctttcataacaacttttattcaatcatcatgccttgccttctcttcaaatcacaactcgcatgcttctttttacgtccttagcttgatgatga...
species | Glycine max |
transcript | GLYMA07G39870.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAG ATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCAEST: gi|27445805|gb|CA952928.1|CA952928
genomic: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAGgtatttcctt ... ttgggtgcagATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCA
EST: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAG ATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCAEST: gi|19347568|gb|BM892448.1|BM892448
genomic: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAGgtatttcctt ... ttgggtgcagATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCA
EST: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAG ATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCAEST: gi|192299493|gb|FG990802.1|FG990802
genomic: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAGgtatttcctt ... ttgggtgcagATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCA
EST: CCATCCATGTCTACTTTTGCAAAATCCCGAG ATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCAEST: gi|151402278|gb|EV272091.1|EV272091
genomic: CCATCCATGTCTACTTCTGCAAAATCCCGAGgtatttcctt ... ttgggtgcagATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCA
EST: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAG ATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCAEST: gi|254317259|gb|GR826204.1|GR826204
genomic: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAGgtatttcctt ... ttgggtgcagATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCA
EST: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAG ATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCA
genomic: TCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAGgtatttcctt ... ttgggtgcagATGTTTGTATTGTTGGTGTTGCGCGGACGCCAATAGGTGGTTTACTTGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTAAAAGGCCGTCTTTCCTCATTTCTGACGTACGCTCCCCATCCATCCATGTCTACTTCTGCAAAATCCCGAGgtatttcctttcataacaacttttattcaatcatcatgccttgccttctcttcaaatcacaactcgcatgcttctttttacgtccttagcttgatgatga
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