1 5' 3' | 2 5' 3' | 3 5' 3' |
CACTTCGGAGGAGTTGAGTATTGGGAAGATAAAGTTTAAGGCTTTCGACTTGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAGgtttcttatatatatatttttttcttatttcaatttttcagtttcacttcatgtttatgaatacaggacattcgaatggttttagttcctttagttcatt...
species | Glycine max |
transcript | GLYMA07G37080.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAG GTGGATGCTGTAGTGTEST: gi|38193171|gb|CF922377.1|CF922377
genomic: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAGgtttcttata ... aatcatgtagGTGGATGCTGTAGTGT
EST: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAG GTGGATGCTGTAGTEST: gi|298188930|gb|HO035623.1|HO035623
genomic: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAGgtttcttata ... aatcatgtagGTGGATGCTGTAGT
EST: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAG GTGGATGCTGTAGTGTACCTGGTTGATGCATTTGACAAGGAAAGGTTTTCAEST: gi|213592566|gb|DB961826.1|DB961826
genomic: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAGgtttcttata ... aatcatgtagGTGGATGCTGTAGTGTACCTGGTTGATGCATTTGACAAGGAAAGGCTTTCA
EST: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAG GTGGATGCTGTAGTGTACCTGGTTGATGCATTTGACAAGGAAAGGTTTTCAEST: gi|298180969|gb|HO022408.1|HO022408
genomic: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAGgtttcttata ... aatcatgtagGTGGATGCTGTAGTGTACCTGGTTGATGCATTTGACAAGGAAAGGCTTTCA
EST: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAG GTGGATGCTGTAGTGTACCTGGTTGATGCATTTGACAAGGAAAGGTTTTCAEST: gi|298190537|gb|HO032658.1|HO032658
genomic: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAGgtttcttata ... aatcatgtagGTGGATGCTGTAGTGTACCTGGTTGATGCATTTGACAAGGAAAGGCTTTCA
EST: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAG GTGGATGCTGTAGTGTACCTGGTTGATGCATTTG
genomic: TGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAGgtttcttata ... aatcatgtagGTGGATGCTGTAGTGTACCTGGTTGATGCATTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACTTCGGAGGAGTTGAGTATTGGGAAGATAAAGTTTAAGGCTTTCGACTTGGGTGGTCACCAGATTGCTCGTAGGGTCTGGAAGGACTATTACGCTCAGgtttcttatatatatatttttttcttatttcaatttttcagtttcacttcatgtttatgaatacaggacattcgaatggttttagttcctttagttcatt
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