Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|21257070|gb|BQ453958.1|BQ453958EST: TCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAG GTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCA
genomic: TCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAGgtatgtcgtg ... tatgtggcagGTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCA
EST:
gi|254346381|gb|GR856103.1|GR856103EST: TCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAG GTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCA
genomic: TCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAGgtatgtcgtg ... tatgtggcagGTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCA
EST:
gi|9899425|gb|BE608393.1|BE608393EST: TCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAG GTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCA
genomic: TCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAGgtatgtcgtg ... tatgtggcagGTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCA
EST:
gi|7924312|gb|AW830338.1|AW830338EST: TCAGGAAAGTTCTGGGAAAACATGCTAAGAACATTATGCTCATGTCTAAG GTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCA
genomic: TCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAGgtatgtcgtg ... tatgtggcagGTTGAAAACCAAGAAGGGGTTGCAAATTTTGATGAAATCCTTGCAAATTCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGACATGATTGCTCTTTCTTTTGTTCGAAAAGGTTCTGACCTGGTGGAAGTCAGGAAAGTTCTGGGAAAACATGCCAAGAACATTATGCTCATGTCTAAGgtatgtcgtgttgcgttctcttttatggaaaagataagtgattctggatctggttaaaaaatgttagtgttctgaattagttgtgatatccttgagatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC