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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACGTGCGTTCCAATGTCTGATCCTGCCGAAGAGGCTGCTTTCATCGAGAAGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAGgttcggaattcgctcttcgattttcggttcaattgttctagggttttggattgtgatgttcgagtttggaattagggttttgtatcgttttttgtggttctggcag

Basic information

species Glycine max
transcript GLYMA07G32480.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151404452|gb|EV274266.1|EV274266
EST:     AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAG                         AATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
genomic: AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAGgttcggaatt ... gttctggcagAATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
EST: gi|213617036|gb|DB961516.1|DB961516
EST:     AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAG                         AATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
genomic: AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAGgttcggaatt ... gttctggcagAATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
EST: gi|209719847|gb|BW674999.1|BW674999
EST:     AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAG                         AATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
genomic: AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAGgttcggaatt ... gttctggcagAATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
EST: gi|213590208|gb|DB963813.1|DB963813
EST:     AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAG                         AATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
genomic: AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAGgttcggaatt ... gttctggcagAATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
EST: gi|23057710|gb|BU578259.1|BU578259
EST:     AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAG                         AATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
genomic: AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAGgttcggaatt ... gttctggcagAATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
EST: gi|6566471|gb|AW234116.1|AW234116
EST:     AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAG                         AATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG
genomic: AGCTCTACGAATACGGCGAGCAACTCAACAATGCCAAGGACAAGTCGCAGgttcggaatt ... gttctggcagAATGTGCAGGATTACCAGGGAATCATAGATGCGGCGAAGACGAGTGTGAAG