Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATCCATCTGTAAGGGGAAAAGCATCAAGCCAGTCAAACTTCAGTGGGGGTGCATTTTACACCACAgtgagtttattagtcaagcatcagcgaataataattatttaagtcaatcaaattgatttttgatgatttaaaaagtcacatagggccataggctatgaac...

Basic information

species Glycine max
transcript GLYMA07G31090.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298171465|gb|HO016497.1|HO016497
EST:     GAAAAGCATCAAGCTAGTCAAACTTCAGTGGGGGTGCATTTTACACCACA                         AATCCTGGAAGTGTTCCCGCTGCCACTAATTCAAGGCTTCCACCTCTTAAG
genomic: GAAAAGCATCAAGCCAGTCAAACTTCAGTGGGGGTGCATTTTACACCACAgtgagtttat ... aaaatgttagAATCCTGGAAGTGTTCCCGCTGCCACTAATTCAAGGCTTCCACCTCTTAAG
EST: gi|151393785|gb|EV263660.1|EV263660
EST:     GAAAAACATCAAGCCAGTCAAACTTCAGTGGGGGTGCATTTTACACCACA                         AATCCTGGAAGTGTTCCCGCTGCCACTAATTCAAGGCTTCCACCTCTTAAG
genomic: GAAAAGCATCAAGCCAGTCAAACTTCAGTGGGGGTGCATTTTACACCACAgtgagtttat ... aaaatgttagAATCCTGGAAGTGTTCCCGCTGCCACTAATTCAAGGCTTCCACCTCTTAAG
EST: gi|298198010|gb|HO039549.1|HO039549
EST:     GAAAAGCATCAAGCCAGTCAAACTTCAGTGGGGGTGCATTTTACACCACA                         AATCCTGGAAGTGTTCCCGCTGCCACTAATTCAAGGCTTCCACCTCTTAAG
genomic: GAAAAGCATCAAGCCAGTCAAACTTCAGTGGGGGTGCATTTTACACCACAgtgagtttat ... aaaatgttagAATCCTGGAAGTGTTCCCGCTGCCACTAATTCAAGGCTTCCACCTCTTAAG