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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCACCCGATGGTTCCTGTTTCCTCACCTCTTCCGACGACAACACTCTCCGCCTCTTCGCGCCgtaacttgacctttcaactctcactatctgctctaatctagtatttccctacaactaattgattcactttccttttcccttctgcag

Basic information

species Glycine max
transcript GLYMA07G30960.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209724271|gb|BW666613.1|BW666613
EST:     CCTGTTTCCTCACCTCTTGCGGACGACAACACTCTCCGCCTCTTCGCGCC                         ACCGGGAACCGAAAGCGACGCTCCCGTTGCTGCTTCCGGCCACGGCGACGG
genomic: CCTGTTTCCTCACCTCTTCCG-ACGACAACACTCTCCGCCTCTTCGCGCCgtaacttgac ... ccttctgcagACCGGGAACCGAAAGCGACGCTCCCGTTGCTGCTTCCGGCCACGGCGACGG
EST: gi|16996753|gb|BM086125.1|BM086125
EST:     TCCTGTTTCCTCACCTCTTCCGACGACAACACTCTCCGCCTCTTCGCGCC                         ACCGGGAACCGAAAGCGACGCTCCCGTTGCTGCTTCCGGCCACGGCGACGG
genomic: TCCTGTTTCCTCACCTCTTCCGACGACAACACTCTCCGCCTCTTCGCGCCgtaacttgac ... ccttctgcagACCGGGAACCGAAAGCGACGCTCCCGTTGCTGCTTCCGGCCACGGCGACGG
EST: gi|208183319|gb|GD981485.1|GD981485
EST:     TCCTGTTTCCTCACCTCTTCCGACGACAACACTCTCCGCCTCTTCGCGCC                         ACCGGGAACCGAAAGCGACGCTCCCGTTGCTGCTTCCGGCCACGGCGACGG
genomic: TCCTGTTTCCTCACCTCTTCCGACGACAACACTCTCCGCCTCTTCGCGCCgtaacttgac ... ccttctgcagACCGGGAACCGAAAGCGACGCTCCCGTTGCTGCTTCCGGCCACGGCGACGG
EST: gi|298169078|gb|HO020438.1|HO020438
EST:     TCCTGTTTCCTCACCTCTTCCGACGACAACACTCTCCGCCTCTTCGCGCC                         ACCGGGAACCGAAAGCGACGCTCCCGTTGCTGCTTCCGGCCACGGCGACGG
genomic: TCCTGTTTCCTCACCTCTTCCGACGACAACACTCTCCGCCTCTTCGCGCCgtaacttgac ... ccttctgcagACCGGGAACCGAAAGCGACGCTCCCGTTGCTGCTTCCGGCCACGGCGACGG