1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GGAGGAGACTATCAATTAGAGCAACAGAAACTGATACCAATGAAGgtgttttggtttttttttttggtttggtggtgctgctcatttcccattatttttgtgtttctcacagaattttttttttttgccccaattggtggggtgtttaatttgagcag
species | Glycine max |
transcript | GLYMA07G18470.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGAGGAGACTATCAATTAGAGCAACAGAAACTGATACCAATGAAG TTCAATCTCAGGCACCGGGTGCAGCGCCATCTAAAGATGGTTCAAGCTTCAEST: gi|213593823|gb|DB957943.1|DB957943
genomic: GGAGGAGACTATCAATTAGAGCAACAGAAACTGATACCAATGAAGgtgttttggt ... atttgagcagTTCAATCTCAGGCACCGGGTGCAGCGCCATCTAAAGATGGTTCAAGCTTCA
EST: GGAGGAGACTATCAATTAGAGCAACAGAAACTGATACCAATGAAG TTCAATCTCAGGCACCGGGTGCAGCGCCATCTAAAGATGGTTCAAGCTTCAEST: gi|213619704|gb|DB967326.1|DB967326
genomic: GGAGGAGACTATCAATTAGAGCAACAGAAACTGATACCAATGAAGgtgttttggt ... atttgagcagTTCAATCTCAGGCACCGGGTGCAGCGCCATCTAAAGATGGTTCAAGCTTCA
EST: GGAGGAGACTATCAATTAGAGCAACAGAAACTGATACCAATGAAG TTCAATCTCAGGCACCGGGTGCAGCGCCATCTAAAGATGGTTCAAGCTTCA
genomic: GGAGGAGACTATCAATTAGAGCAACAGAAACTGATACCAATGAAGgtgttttggt ... atttgagcagTTCAATCTCAGGCACCGGGTGCAGCGCCATCTAAAGATGGTTCAAGCTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGGAGACTATCAATTAGAGCAACAGAAACTGATACCAATGAAGgtgttttggtttttttttttggtttggtggtgctgctcatttcccattatttttgtgtttctcacagaattttttttttttgccccaattggtggggtgtttaatttgagcag
GAGGAG
- AGGAGA
- - - - - - - - AGAGCA