1 5' 3' | 2 5' 3' | 3 5' 3' |
GTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAGgttttttcactcaccccccttttattttgtctatttttgtttactgttttatcttcttttttttattattataaggagaatttgatacttctgtgttatt...
species | Glycine max |
transcript | GLYMA07G14260.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAG TCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTGEST: gi|298165164|gb|HO011213.1|HO011213
genomic: AAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAGgttttttcac ... ttttggacagTCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTG
EST: AAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAG TCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTGEST: gi|12690291|gb|BG156627.1|BG156627
genomic: AAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAGgttttttcac ... ttttggacagTCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTG
EST: AAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAG TCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTGEST: gi|193566533|gb|FK522478.1|FK522478
genomic: AAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAGgttttttcac ... ttttggacagTCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTG
EST: AAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAG TCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTG
genomic: AAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAGgttttttcac ... ttttggacagTCGGCTCACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATAAGCCCGTGGAAGCCCTTAAAACTGCCCTTGAAGGCACATATGCGATCATTGGGGATGAGCGTTGCAAGgttttttcactcaccccccttttattttgtctatttttgtttactgttttatcttcttttttttattattataaggagaatttgatacttctgtgttatt
- - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caccccc