Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|12773484|gb|BG238411.1|BG238411EST: ACTTTACGGCAGCGACAACCTGGGAAACATTTCTCAGAATATGCTGCACG CTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAGTATCTTCACATGCTTGG
genomic: ACTTTACGGCAGCGACAACCTGGGAAACATTTCTCAGAATATGCTGCACGgtatgctgta ... ctacatatagCTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAGTATCTTCACATGCTTGG
EST:
gi|9259113|gb|BE347260.1|BE347260EST: ACTTTACGGCAGCGACAACCTGGGAAACATTTCTCAGAATATGCTGCACG CTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAGTATCTTCACATGCTTGG
genomic: ACTTTACGGCAGCGACAACCTGGGAAACATTTCTCAGAATATGCTGCACGgtatgctgta ... ctacatatagCTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAGTATCTTCACATGCTTGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACCGATTCTTGTGTTTGGTAATGGAATATTGTCCGGGCGGTGATCTTCACACTTTACGGCAGCGACAACCTGGGAAACATTTCTCAGAATATGCTGCACGgtatgctgtatatttgcataatttgtttcctttacctaagctttttttaattactttccatcctgaagatctgctttggactacggtgaccgacttttct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC