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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACCTTCATCAAGTAATTAGGGCAAATGATGATCTTTCCCCCGAGCACTACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATTTATACATGCAGgtatccttgtaattaagtccttgactgttgctgatagtgataataaactaaaataacattttttcttgcag

Basic information

species Glycine max
transcript GLYMA07G11470.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA07G11470.1 (Glycine max), 5'ss of exon 2
lower sequence: Vv17s0000g02570.t01 (Vitis vinifera), 5'ss of exon 2
GACCTTCATCAAGTAATTAGGGCAAATGATGATCTTTCCCCCGAGCACTACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATTTATACATGCAGgt--atccttgtaa------ttaagtccttgactgttgctgat------------agtgataataaactaaaataacattttttcttgcag
|| |||||||||||||||| |||||| ||||||||| | ||||||||||| ||||||||||||||||| |||||||| || || |||| ||||||| |||||   | ||| | |      |||   |||   |  ||| |               | ||   |  ||  |||||   ||  |||||| |||
GATCTTCATCAAGTAATTAAGGCAAACGATGATCTTACTCCCGAGCACTATCAATTTTTCTTGTACCAGCTTCTTCGGGGTCTAAAATATATACATACAGgttggtgcttttcagagatattatagcctcaccgtttgtttgcttttatgtcctgaatggccactaataaaaattttatggtttcttccag