1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TGCAACAGCACTGCAGCTGGTGGGGCACTCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAGgtaaaatgcaaactaccaggcagaagcttccaacccccaactctctatcaggcataaaagcacacataagcacacacaaacacatgtgggggtgtaattg...
species | Glycine max |
transcript | GLYMA07G09180.3 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAG GTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTEST: gi|120493768|gb|EH221935.1|EH221935
genomic: TCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAGgtaaaatgca ... tcaatttcagGTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTT
EST: TCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAG GGTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGGCCTTCATCAGCTCGGTEST: gi|19348059|gb|BM892591.1|BM892591
genomic: TCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAGgtaaaatgca ... tcaatttcagGTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTT
EST: TCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAG GTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTEST: gi|208239088|gb|GE037166.1|GE037166
genomic: TCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAGgtaaaatgca ... tcaatttcagGTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTT
EST: GCTAGGGTTCAACCCTCTGCTACAACGCAGACTACATTCAAG GTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTT
genomic: GCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAGgtaaaatgca ... tcaatttcagGTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCAACAGCACTGCAGCTGGTGGGGCACTCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAGgtaaaatgcaaactaccaggcagaagcttccaacccccaactctctatcaggcataaaagcacacataagcacacacaaacacatgtgggggtgtaattg
- - - - - - - - - - - - - - - AAGAAA